49#ifndef GUM_SHAFER_SHENOY_MN_INFERENCE_H
50#define GUM_SHAFER_SHENOY_MN_INFERENCE_H
65 template <
typename GUM_SCALAR >
67 const Tensor< GUM_SCALAR >& t2) {
72 template <
typename GUM_SCALAR >
75 return t1.sumOut(del_vars);
85 template <
typename GUM_SCALAR >
98 bool use_binary_join_tree =
true);
228 const
NodeSet& declared_target) final;
407 const Tensor< GUM_SCALAR >&));
465#ifndef GUM_NO_EXTERN_TEMPLATE_CLASS
Implementation of Shafer-Shenoy's propagation for inference in Markov random fields.
EvidenceMRFInference(const IMarkovRandomField< GUM_SCALAR > *mn)
default constructor
Virtual base class for probabilistic graphical models.
The class for generic Hash Tables.
Class representing the minimal interface for Markov random field.
The Table-agnostic base class of scheduleMultiDim.
JointTargetedMRFInference(const IMarkovRandomField< GUM_SCALAR > *mn)
default constructor
Class containing a schedule of operations to perform on multidims.
ScheduledInference(Size max_nb_threads=0, double max_megabyte_memory=0.0)
default constructor
Safe iterators for the Set class.
<agrum/MRF/inference/ShaferShenoyMRFInference.h>
void onAllJointTargetsErased_() final
fired before all the joint targets are removed
HashTable< const Tensor< GUM_SCALAR > *, GUM_SCALAR > _constants_
the constants resulting from the projections of CPTs defined over only hard evidence nodes @TODO remo...
void _setProjectionFunction_(Tensor< GUM_SCALAR >(*proj)(const Tensor< GUM_SCALAR > &, const gum::VariableSet &))
sets the operator for performing the projections
UndiGraph _graph_
the undigraph extracted from the MRF and used to construct the join tree
bool _use_binary_join_tree_
indicates whether we should transform junction trees into binary join trees
void onAllEvidenceErased_(bool has_hard_evidence) final
fired before all the evidence are erased
Triangulation * _triangulation_
the triangulation class creating the junction tree used for inference
void updateOutdatedTensors_() final
prepares inference when the latter is in OutdatedTensors state
NodeProperty< EvidenceChangeType > _evidence_changes_
indicates which nodes of the MRF have evidence that changed since the last inference
void setTriangulation(const Triangulation &new_triangulation)
use a new triangulation algorithm
void _setCombinationFunction_(Tensor< GUM_SCALAR >(*comb)(const Tensor< GUM_SCALAR > &, const Tensor< GUM_SCALAR > &))
sets the operator for performing the combinations
ShaferShenoyMRFInference< GUM_SCALAR > & operator=(const ShaferShenoyMRFInference< GUM_SCALAR > &)=delete
avoid copy operators
NodeProperty< const IScheduleMultiDim * > _clique_ss_tensor_
the tensors stored into the cliques by Shafer-Shenoy
NodeProperty< _ScheduleMultiDimSet_ > _clique_tensors_
the list of all tensors stored in the cliques
HashTable< const Tensor< GUM_SCALAR > *, const IScheduleMultiDim * > _hard_ev_projected_factors_
the factors that were projected due to hard evidence nodes
bool _is_new_jt_needed_
indicates whether a new join tree is needed for the next inference
void _initializeJTCliques_(Schedule &schedule)
put all the CPTs into the cliques when creating the JT using a schedule
void makeInference_() final
called when the inference has to be performed effectively
void onStateChanged_() final
fired when the state of the inference engine is changed
JoinTree * _JT_
the join (or junction) tree used to answer the last inference query
const JoinTree * joinTree()
returns the current join tree used
void _initializeJTCliques_()
put all the CPTs into the cliques when creating the JT without using a schedule
void onAllMarginalTargetsAdded_() final
fired after all the nodes of the MRF are added as single targets
const Tensor< GUM_SCALAR > & jointPosterior_(const NodeSet &set) final
returns the posterior of a declared target set
virtual bool isExactJointComputable_(const NodeSet &vars) final
check if the vars form a possible computable joint (can be redefined by subclass)
Tensor< GUM_SCALAR > * _unnormalizedJointPosterior_(Schedule &schedule, NodeId id)
computes the unnormalized posterior of a node using schedules
const IScheduleMultiDim * _marginalizeOut_(_ScheduleMultiDimSet_ &pot_list, gum::VariableSet &del_vars, gum::VariableSet &kept_vars)
removes variables del_vars from a list of tensors and returns the resulting list directly without sch...
void _createNewJT_()
create a new junction tree as well as its related data structures
HashTable< NodeSet, const Tensor< GUM_SCALAR > * > _joint_target_posteriors_
the set of set target posteriors computed during the last inference
void onMarginalTargetAdded_(const NodeId id) final
fired after a new single target is inserted
HashTable< NodeSet, NodeId > _joint_target_to_clique_
for each set target, assign a clique in the JT that contains it
ArcProperty< bool > _messages_computed_
indicates whether a message (from one clique to another) has been computed
NodeProperty< _TensorSet_ > _node_to_factors_
assign to each node the set of factors containing it
Set< const IScheduleMultiDim * > _ScheduleMultiDimSet_
void _invalidateAllMessages_()
invalidate all messages, posteriors and created tensors
void updateOutdatedStructure_() final
prepares inference when the latter is in OutdatedStructure state
void onJointTargetAdded_(const NodeSet &set) final
fired after a new joint target is inserted
void _produceMessage_(NodeId from_id, NodeId to_id)
creates the message sent by clique from_id to clique to_id without schedules
void _collectMessage_(Schedule &schedule, NodeId id, NodeId from)
perform the collect phase using schedules
HashTable< const Tensor< GUM_SCALAR > *, NodeId > _factor_to_clique_
assign to each factor in the MRF the clique that will contain it
Tensor< GUM_SCALAR >(* _projection_op_)(const Tensor< GUM_SCALAR > &, const gum::VariableSet &)
the operator for performing the projections
GUM_SCALAR evidenceProbability() final
returns the probability of evidence
bool _use_schedules_
indicates whether we should use schedules for inference
static constexpr double _schedule_threshold_
minimal number of operations to perform in the JT to use schedules
NodeSet _hard_ev_nodes_
the hard evidence nodes which were projected in factors
Tensor< GUM_SCALAR > * _unnormalizedJointPosterior_(NodeId id)
computes the unnormalized posterior of a node without using schedules
void onModelChanged_(const GraphicalModel *mn) final
fired after a new Markov net has been assigned to the inference engine
NodeProperty< NodeId > _node_to_clique_
for each node of graph (~ in the Markov net), associate an ID in the JT
void onAllMarginalTargetsErased_() final
fired before all the single targets are removed
virtual NodeSet superForJointComputable_(const NodeSet &vars) final
void onEvidenceChanged_(const NodeId id, bool hasChangedSoftHard) final
fired after an evidence is changed, in particular when its status (soft/hard) changes
const Tensor< GUM_SCALAR > & posterior_(NodeId id) final
returns the posterior of a given variable
Tensor< GUM_SCALAR > * unnormalizedJointPosterior_(NodeId id) final
returns a fresh tensor equal to P(argument,evidence)
void onEvidenceErased_(const NodeId id, bool isHardEvidence) final
fired before an evidence is removed
~ShaferShenoyMRFInference()
destructor
void onMarginalTargetErased_(const NodeId id) final
fired before a single target is removed
EvidenceChangeType
the possible types of evidence changes
void onEvidenceAdded_(const NodeId id, bool isHardEvidence) final
fired after a new evidence is inserted
void _diffuseMessageInvalidations_(NodeId from_id, NodeId to_id, NodeSet &invalidated_cliques)
invalidate all the messages sent from a given clique
void _computeJoinTreeRoots_()
compute a root for each connected component of JT
void onJointTargetErased_(const NodeSet &set) final
fired before a joint target is removed
Set< const Tensor< GUM_SCALAR > * > _TensorSet_
SetIteratorSafe< const Tensor< GUM_SCALAR > * > _TensorSetIterator_
const IScheduleMultiDim * _marginalizeOut_(Schedule &schedule, _ScheduleMultiDimSet_ pot_list, gum::VariableSet &del_vars, gum::VariableSet &kept_vars)
removes variables del_vars from a list of tensors and returns the resulting list using schedules
ArcProperty< const IScheduleMultiDim * > _arc_to_created_tensors_
the set of tensors created for the last inference messages
NodeSet _roots_
a clique node used as a root in each connected component of JT
void onAllTargetsErased_() final
fired before all single and joint targets are removed
Tensor< GUM_SCALAR >(* _combination_op_)(const Tensor< GUM_SCALAR > &, const Tensor< GUM_SCALAR > &)
the operator for performing the combinations
bool _isNewJTNeeded_() const
check whether a new join tree is really needed for the next inference
void _collectMessage_(NodeId id, NodeId from)
actually perform the collect phase directly without schedules
Tensor< GUM_SCALAR > * _unnormalizedJointPosterior_(const NodeSet &set)
returns a fresh tensor equal to P(argument,evidence) without using schedules
ArcProperty< const IScheduleMultiDim * > _separator_tensors_
the list of all tensors stored in the separators after inferences
void _produceMessage_(Schedule &schedule, NodeId from_id, NodeId to_id)
creates the message sent by clique from_id to clique to_id using schedules
NodeProperty< const IScheduleMultiDim * > _node_to_soft_evidence_
the soft evidence stored in the cliques per their assigned node in the MRF
JunctionTree * _junctionTree_
the junction tree to answer the last inference query
Tensor< GUM_SCALAR > * _unnormalizedJointPosterior_(Schedule &schedule, const NodeSet &set)
returns a fresh tensor equal to P(argument,evidence) using schedules
ShaferShenoyMRFInference(const IMarkovRandomField< GUM_SCALAR > *MN, bool use_binary_join_tree=true)
default constructor
const JunctionTree * junctionTree()
returns the current junction tree
NodeProperty< const Tensor< GUM_SCALAR > * > _target_posteriors_
the set of single posteriors computed during the last inference
virtual void onMRFChanged_(const IMarkovRandomField< GUM_SCALAR > *mn) final
fired after a new Markov net has been assigned to the inference engine
static constexpr GUM_SCALAR _one_minus_epsilon_
for comparisons with 1 - epsilon
ShaferShenoyMRFInference(const ShaferShenoyMRFInference< GUM_SCALAR > &)=delete
avoid copy constructors
aGrUM's Tensor is a multi-dimensional array with tensor operators.
Interface for all the triangulation methods.
Base class for undirected graphs.
Class for computing default triangulations of graphs.
This file contains the abstract class definition for computing the probability of evidence entered in...
Size NodeId
Type for node ids.
HashTable< Arc, VAL > ArcProperty
Property on graph elements.
HashTable< NodeId, VAL > NodeProperty
Property on graph elements.
Set< NodeId > NodeSet
Some typdefs and define for shortcuts ...
This file contains the abstract inference class definition for computing (incrementally) joint poster...
gum is the global namespace for all aGrUM entities
Set< const DiscreteVariable * > VariableSet
CliqueGraph JoinTree
a join tree is a clique graph satisfying the running intersection property (but some cliques may be i...
static INLINE Tensor< GUM_SCALAR > SSNewMNmultiTensor(const Tensor< GUM_SCALAR > &t1, const Tensor< GUM_SCALAR > &t2)
CliqueGraph JunctionTree
a junction tree is a clique graph satisfying the running intersection property and such that no cliqu...
static INLINE Tensor< GUM_SCALAR > SSNewMNprojTensor(const Tensor< GUM_SCALAR > &t1, const gum::VariableSet &del_vars)
The class enabling flexible inferences using schedules.