aGrUM
3.2.0
a C++ library for (probabilistic) graphical models
Toggle main menu visibility
BIFWriter.h
Go to the documentation of this file.
1
/****************************************************************************
2
* This file is part of the aGrUM/pyAgrum library. *
3
* *
4
* Copyright (c) 2005-2026 by *
5
* - Pierre-Henri WUILLEMIN(_at_LIP6) *
6
* - Christophe GONZALES(_at_AMU) *
7
* *
8
* The aGrUM/pyAgrum library is free software; you can redistribute it *
9
* and/or modify it under the terms of either : *
10
* *
11
* - the GNU Lesser General Public License as published by *
12
* the Free Software Foundation, either version 3 of the License, *
13
* or (at your option) any later version, *
14
* - the MIT license (MIT), *
15
* - or both in dual license, as here. *
16
* *
17
* (see https://agrum.gitlab.io/articles/dual-licenses-lgplv3mit.html) *
18
* *
19
* This aGrUM/pyAgrum library is distributed in the hope that it will be *
20
* useful, but WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, *
21
* INCLUDING BUT NOT LIMITED TO THE WARRANTIES MERCHANTABILITY or FITNESS *
22
* FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE *
23
* AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER *
24
* LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, *
25
* ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR *
26
* OTHER DEALINGS IN THE SOFTWARE. *
27
* *
28
* See LICENCES for more details. *
29
* *
30
* SPDX-FileCopyrightText: Copyright 2005-2026 *
31
* - Pierre-Henri WUILLEMIN(_at_LIP6) *
32
* - Christophe GONZALES(_at_AMU) *
33
* SPDX-License-Identifier: LGPL-3.0-or-later OR MIT *
34
* *
35
* Contact : info_at_agrum_dot_org *
36
* homepage : http://agrum.gitlab.io *
37
* gitlab : https://gitlab.com/agrumery/agrum *
38
* *
39
****************************************************************************/
40
41
51
52
#ifndef GUM_BIF_WRITER_H
53
#define GUM_BIF_WRITER_H
54
55
#include <fstream>
56
#include <iostream>
57
#include <sstream>
58
#include <string>
59
60
#include <
agrum/agrum.h
>
61
62
#include <
agrum/BN/io/BNWriter.h
>
63
64
namespace
gum
{
65
78
template
< GUM_Numeric GUM_SCALAR >
79
class
BIFWriter
final:
public
BNWriter
< GUM_SCALAR > {
80
public
:
81
// ==========================================================================
83
// ==========================================================================
85
89
BIFWriter
();
90
94
~BIFWriter
()
override
;
95
96
BIFWriter
(
const
BIFWriter
&) =
default
;
97
BIFWriter
(
BIFWriter
&&) noexcept = default;
98
BIFWriter
& operator=(const
BIFWriter
&) = default;
99
BIFWriter
& operator=(
BIFWriter
&&) noexcept = default;
100
102
103
protected:
111
void
_doWrite
(
std
::ostream& output, const
IBayesNet
< GUM_SCALAR >& bn) final;
112
121
void
_doWrite
(
std
::string_view filePath, const
IBayesNet
< GUM_SCALAR >& bn) final;
122
128
void
_syntacticalCheck
(const
IBayesNet
< GUM_SCALAR >& bn) final;
129
130
private:
131
// Returns the header of the BIF file.
132
std
::
string
_header_
(const
IBayesNet
< GUM_SCALAR >& bn);
133
134
// Returns a bloc defining a variable in the BIF format.
135
std
::
string
_variableBloc_
(const
DiscreteVariable
& var);
136
137
// Returns a bloc defining a variable's CPT in the BIF format.
138
std
::
string
_variableCPT_
(const
Tensor
< GUM_SCALAR >& cpt);
139
140
// Returns the modalities labels of the variables in varsSeq
141
std
::
string
_variablesLabels_
(const
Sequence
< const
DiscreteVariable
* >& varsSeq,
142
const
Instantiation
& inst);
143
};
144
145
146
#ifndef GUM_NO_EXTERN_TEMPLATE_CLASS
147
extern
template
class
GUM_PUBLIC_BN
BIFWriter< double >
;
148
#endif
149
150
}
/* namespace gum */
151
152
#include <
agrum/BN/io/BIF/BIFWriter_tpl.h
>
153
#endif
// GUM_BIF_WRITER_H
BIFWriter_tpl.h
BNWriter.h
Definition of abstract classes for file output manipulation of Bayesian networks.
agrum.h
gum::BIFWriter::_variablesLabels_
std::string _variablesLabels_(const Sequence< const DiscreteVariable * > &varsSeq, const Instantiation &inst)
gum::BIFWriter::BIFWriter
BIFWriter()
Default constructor.
gum::BIFWriter::BIFWriter
BIFWriter(BIFWriter &&) noexcept=default
Default constructor.
gum::BIFWriter::_variableCPT_
std::string _variableCPT_(const Tensor< GUM_SCALAR > &cpt)
gum::BIFWriter::_variableBloc_
std::string _variableBloc_(const DiscreteVariable &var)
gum::BIFWriter::BIFWriter
BIFWriter(const BIFWriter &)=default
Default constructor.
gum::BIFWriter::_syntacticalCheck
void _syntacticalCheck(const IBayesNet< GUM_SCALAR > &bn) final
Check whether the BN is syntactically correct for BIF format.
gum::BIFWriter::~BIFWriter
~BIFWriter() override
Destructor.
gum::BIFWriter::_doWrite
void _doWrite(std::ostream &output, const IBayesNet< GUM_SCALAR > &bn) final
Writes a Bayesian network in the output stream using the BIF format.
gum::BIFWriter::_header_
std::string _header_(const IBayesNet< GUM_SCALAR > &bn)
gum::BNWriter::BNWriter
BNWriter()
Default constructor.
gum::DiscreteVariable
Base class for discrete random variable.
Definition
discreteVariable.h:80
gum::IBayesNet
Class representing the minimal interface for Bayesian network with no numerical data.
Definition
IBayesNet.h:75
gum::Instantiation
Class for assigning/browsing values to tuples of discrete variables.
Definition
instantiation.h:102
gum::Sequence
The generic class for storing (ordered) sequences of objects.
Definition
sequence.h:994
gum::Tensor
aGrUM's Tensor is a multi-dimensional array with tensor operators.
Definition
tensor.h:85
gum
gum is the global namespace for all aGrUM entities
Definition
agrum.h:46
gum::BIFWriter< double >
template class GUM_PUBLIC_BN BIFWriter< double >
Definition
BIFWriter.cpp:46
std
STL namespace.
aGrUM
3.2.0
© PHW&CG&others - 2022
DoXyGeN 1.18.0