aGrUM
3.2.0
a C++ library for (probabilistic) graphical models
Toggle main menu visibility
GTestPolicy_tpl.h
Go to the documentation of this file.
1
/****************************************************************************
2
* This file is part of the aGrUM/pyAgrum library. *
3
* *
4
* Copyright (c) 2005-2026 by *
5
* - Pierre-Henri WUILLEMIN(_at_LIP6) *
6
* - Christophe GONZALES(_at_AMU) *
7
* *
8
* The aGrUM/pyAgrum library is free software; you can redistribute it *
9
* and/or modify it under the terms of either : *
10
* *
11
* - the GNU Lesser General Public License as published by *
12
* the Free Software Foundation, either version 3 of the License, *
13
* or (at your option) any later version, *
14
* - the MIT license (MIT), *
15
* - or both in dual license, as here. *
16
* *
17
* (see https://agrum.gitlab.io/articles/dual-licenses-lgplv3mit.html) *
18
* *
19
* This aGrUM/pyAgrum library is distributed in the hope that it will be *
20
* useful, but WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, *
21
* INCLUDING BUT NOT LIMITED TO THE WARRANTIES MERCHANTABILITY or FITNESS *
22
* FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE *
23
* AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER *
24
* LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, *
25
* ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR *
26
* OTHER DEALINGS IN THE SOFTWARE. *
27
* *
28
* See LICENCES for more details. *
29
* *
30
* SPDX-FileCopyrightText: Copyright 2005-2026 *
31
* - Pierre-Henri WUILLEMIN(_at_LIP6) *
32
* - Christophe GONZALES(_at_AMU) *
33
* SPDX-License-Identifier: LGPL-3.0-or-later OR MIT *
34
* *
35
* Contact : info_at_agrum_dot_org *
36
* homepage : http://agrum.gitlab.io *
37
* gitlab : https://gitlab.com/agrumery/agrum *
38
* *
39
****************************************************************************/
40
41
#pragma once
42
43
50
// =========================================================================
51
#include <
agrum/FMDP/learning/core/testPolicy/GTestPolicy.h
>
52
53
#include <
agrum/base/core/math/math_utils.h
>
54
55
// =========================================================================
56
57
58
namespace
gum
{
59
60
61
// ##########################################################################
62
//
63
// ##########################################################################
64
65
// ==========================================================================
66
//
67
// ==========================================================================
68
template
<
typename
GUM_ELEMENT >
69
void
GTestPolicy< GUM_ELEMENT >::addObservation
(
Idx
iattr, GUM_ELEMENT ivalue) {
70
ITestPolicy< GUM_ELEMENT >::addObservation
(iattr, ivalue);
71
_conTab_
.add(iattr, ivalue);
72
}
73
74
// ############################################################################
75
// @name Test result
76
// ############################################################################
77
78
// ============================================================================
79
// Computes the GStat of current variable according to the test
80
// ============================================================================
81
template
<
typename
GUM_ELEMENT >
82
void
GTestPolicy< GUM_ELEMENT >::computeScore
()
const
{
83
ITestPolicy< GUM_ELEMENT >::computeScore
();
84
_GStat_
= 0;
85
86
// Itération sur l'axe 1 du tableau
87
for
(
auto
attrIter =
_conTab_
.attrABeginSafe(); attrIter !=
_conTab_
.attrAEndSafe();
88
++attrIter) {
89
// Mise en cache de valeur utile
90
double
semiExpected = (
double
)(attrIter.val()) / (
double
)this->
nbObservation
();
91
92
// Itération sur l'axe 2 du tableau
93
for
(
auto
valIter =
_conTab_
.attrBBeginSafe(); valIter !=
_conTab_
.attrBEndSafe();
94
++valIter) {
95
// Récupération de la valeur en cellule
96
Idx
cell =
_conTab_
.joint(attrIter.key(), valIter.key());
97
if
(cell < 5)
continue
;
98
99
// Récupération de la valeur en axe 2
100
double
expected = semiExpected * (
double
)valIter.val();
101
102
_GStat_
+= 2 * cell * log(cell / expected);
103
}
104
}
105
}
106
107
// ============================================================================
108
// Returns the performance of current variable according to the test
109
// ============================================================================
110
template
<
typename
GUM_ELEMENT >
111
double
GTestPolicy< GUM_ELEMENT >::score
()
const
{
112
if
(this->
isModified_
())
computeScore
();
113
// std::cout << this->toString() << std::endl;
114
double
score
115
= 1
116
-
ChiSquare::probaChi2
(
_GStat_
, (
_conTab_
.attrASize() - 1) * (
_conTab_
.attrBSize() - 1));
117
return
score
;
118
}
119
120
// ============================================================================
121
// Returns a second criterion to severe ties
122
// ============================================================================
123
template
<
typename
GUM_ELEMENT >
124
double
GTestPolicy< GUM_ELEMENT >::secondaryscore
()
const
{
125
if
(this->
isModified_
())
computeScore
();
126
return
_GStat_
;
127
}
128
129
template
<
typename
GUM_ELEMENT >
130
void
GTestPolicy< GUM_ELEMENT >::add
(
const
GTestPolicy< GUM_ELEMENT >
& src) {
131
ITestPolicy< GUM_ELEMENT >::add
(src);
132
_conTab_
+= src.
ct
();
133
}
134
135
template
<
typename
GUM_ELEMENT >
136
GTestPolicy< GUM_ELEMENT >::GTestPolicy
() :
ITestPolicy
< GUM_ELEMENT >(),
_conTab_
(),
_GStat_
(0) {
137
GUM_CONSTRUCTOR(
GTestPolicy
);
138
}
139
140
template
<
typename
GUM_ELEMENT >
141
GTestPolicy< GUM_ELEMENT >::~GTestPolicy
() {
142
GUM_DESTRUCTOR(
GTestPolicy
);
143
;
144
}
145
146
template
<
typename
GUM_ELEMENT >
147
void
*
GTestPolicy< GUM_ELEMENT >::operator
new
(
size_t
s) {
148
return
SmallObjectAllocator::instance
().
allocate
(s);
149
}
150
151
template
<
typename
GUM_ELEMENT >
152
void
GTestPolicy< GUM_ELEMENT >::operator
delete
(
void
* p) {
153
SmallObjectAllocator::instance
().
deallocate
(p,
sizeof
(
GTestPolicy
));
154
}
155
156
template
<
typename
GUM_ELEMENT >
157
bool
GTestPolicy< GUM_ELEMENT >::isTestRelevant
()
const
{
158
return
(this->
nbObservation
() > 20 && this->
nbObservation
() >
_conTab_
.attrASize() * 5);
159
}
160
161
template
<
typename
GUM_ELEMENT >
162
const
ContingencyTable< Idx, GUM_ELEMENT >
&
GTestPolicy< GUM_ELEMENT >::ct
()
const
{
163
return
_conTab_
;
164
}
165
166
template
<
typename
GUM_ELEMENT >
167
std::string
GTestPolicy< GUM_ELEMENT >::toString
()
const
{
168
return
std::format(
"{}\t\t\tContingency Table : \n{}\n\t\t\tGStat : {}\n\t\t\tGStat : {}\n"
,
169
ITestPolicy< GUM_ELEMENT >::toString
(),
170
_conTab_
.toString(),
171
_GStat_
,
172
this->secondaryscore());
173
}
174
175
}
// End of namespace gum
GTestPolicy.h
Headers of the GTestPolicy.
double
gum::ChiSquare::probaChi2
static double probaChi2(double x, Size df)
computes the probability of chi2 value (used by the cache)
Definition
chiSquare.cpp:137
gum::ContingencyTable< Idx, GUM_ELEMENT >
gum::GTestPolicy::score
double score() const override
Returns the performance of current variable according to the test.
Definition
GTestPolicy_tpl.h:111
gum::GTestPolicy::isTestRelevant
bool isTestRelevant() const override
Returns true if enough observation were made so that the test can be relevant.
Definition
GTestPolicy_tpl.h:157
gum::GTestPolicy::GTestPolicy
GTestPolicy()
Constructor.
Definition
GTestPolicy_tpl.h:136
gum::GTestPolicy::~GTestPolicy
~GTestPolicy() override
Destructor.
Definition
GTestPolicy_tpl.h:141
gum::GTestPolicy::addObservation
void addObservation(Idx iattr, GUM_ELEMENT ivalue) override
Comptabilizes the new observation.
Definition
GTestPolicy_tpl.h:69
gum::GTestPolicy::_conTab_
ContingencyTable< Idx, GUM_ELEMENT > _conTab_
The contingency table used to keeps records of all observation.
Definition
GTestPolicy.h:173
gum::GTestPolicy::toString
std::string toString() const
Definition
GTestPolicy_tpl.h:167
gum::GTestPolicy::secondaryscore
double secondaryscore() const override
Returns a second criterion to severe ties.
Definition
GTestPolicy_tpl.h:124
gum::GTestPolicy::_GStat_
double _GStat_
Definition
GTestPolicy.h:174
gum::GTestPolicy::computeScore
void computeScore() const override
Computes the GStat of current variable according to the test.
Definition
GTestPolicy_tpl.h:82
gum::GTestPolicy::add
void add(const GTestPolicy< GUM_ELEMENT > &src)
Performs the merging of current GTestPolicy instance with given instance.
Definition
GTestPolicy_tpl.h:130
gum::GTestPolicy::ct
const ContingencyTable< Idx, GUM_ELEMENT > & ct() const
Returns contingency table (needed for the merging of GTestPolicy instances).
Definition
GTestPolicy_tpl.h:162
gum::ITestPolicy::ITestPolicy
ITestPolicy()
Allocators and Deallocators redefinition.
Definition
ITestPolicy_tpl.h:49
gum::ITestPolicy::isModified_
bool isModified_() const
Definition
ITestPolicy_tpl.h:97
gum::ITestPolicy::addObservation
virtual void addObservation(Idx attr, GUM_ELEMENT value)
Comptabilizes the new observation.
Definition
ITestPolicy_tpl.h:70
gum::ITestPolicy::computeScore
virtual void computeScore() const
Recomputes the statistic from the beginning.
Definition
ITestPolicy_tpl.h:81
gum::ITestPolicy::add
void add(const ITestPolicy< GUM_ELEMENT > &src)
Definition
ITestPolicy_tpl.h:86
gum::ITestPolicy::nbObservation
Idx nbObservation() const
Comptabilizes the new observation.
Definition
ITestPolicy_tpl.h:76
gum::ITestPolicy::toString
std::string toString() const
Definition
ITestPolicy_tpl.h:92
gum::SmallObjectAllocator::instance
static SmallObjectAllocator & instance()
Definition
smallObjectAllocator_inl.h:96
gum::SmallObjectAllocator::allocate
void * allocate(const size_t &objectSize)
Allocates a block.
Definition
smallObjectAllocator.cpp:72
gum::SmallObjectAllocator::deallocate
void deallocate(void *pDeallocatedObject, const size_t &objectSize)
Deallocates an object.
Definition
smallObjectAllocator_inl.h:116
gum::Idx
Size Idx
Type for indexes.
Definition
types.h:79
math_utils.h
Useful macros for maths.
gum
gum is the global namespace for all aGrUM entities
Definition
agrum.h:46
aGrUM
3.2.0
© PHW&CG&others - 2022
DoXyGeN 1.18.0