aGrUM
3.2.0
a C++ library for (probabilistic) graphical models
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Chi2TestPolicy_tpl.h
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/****************************************************************************
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* This file is part of the aGrUM/pyAgrum library. *
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* *
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* Copyright (c) 2005-2026 by *
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* - Pierre-Henri WUILLEMIN(_at_LIP6) *
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* - Christophe GONZALES(_at_AMU) *
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* *
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* The aGrUM/pyAgrum library is free software; you can redistribute it *
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* and/or modify it under the terms of either : *
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* *
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* - the GNU Lesser General Public License as published by *
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* the Free Software Foundation, either version 3 of the License, *
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* or (at your option) any later version, *
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* - the MIT license (MIT), *
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* - or both in dual license, as here. *
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* *
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* (see https://agrum.gitlab.io/articles/dual-licenses-lgplv3mit.html) *
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* *
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* This aGrUM/pyAgrum library is distributed in the hope that it will be *
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* useful, but WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, *
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* INCLUDING BUT NOT LIMITED TO THE WARRANTIES MERCHANTABILITY or FITNESS *
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* OTHER DEALINGS IN THE SOFTWARE. *
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* See LICENCES for more details. *
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* *
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* SPDX-FileCopyrightText: Copyright 2005-2026 *
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* - Pierre-Henri WUILLEMIN(_at_LIP6) *
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* - Christophe GONZALES(_at_AMU) *
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* SPDX-License-Identifier: LGPL-3.0-or-later OR MIT *
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* *
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* Contact : info_at_agrum_dot_org *
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* homepage : http://agrum.gitlab.io *
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* gitlab : https://gitlab.com/agrumery/agrum *
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* *
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****************************************************************************/
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#pragma once
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// =========================================================================
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#include <
agrum/FMDP/learning/core/testPolicy/Chi2TestPolicy.h
>
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// =========================================================================
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namespace
gum
{
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// ##########################################################################
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//
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// ##########################################################################
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// ==========================================================================
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//
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// ==========================================================================
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template
<
typename
GUM_ELEMENT >
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void
Chi2TestPolicy< GUM_ELEMENT >::addObservation
(
Idx
iattr, GUM_ELEMENT ivalue) {
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ITestPolicy< GUM_ELEMENT >::addObservation
(iattr, ivalue);
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_conTab_
.add(iattr, ivalue);
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}
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// ############################################################################
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// @name Test result
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// ############################################################################
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// ============================================================================
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// Computes the GStat of current variable according to the test
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// ============================================================================
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template
<
typename
GUM_ELEMENT >
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void
Chi2TestPolicy< GUM_ELEMENT >::computeScore
()
const
{
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ITestPolicy< GUM_ELEMENT >::computeScore
();
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_chi2Score_
= 0;
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for
(
auto
attrIter =
_conTab_
.attrABeginSafe(); attrIter !=
_conTab_
.attrAEndSafe();
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++attrIter) {
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double
semiExpected = (
double
)(attrIter.val()) / (
double
)this->
nbObservation
();
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for
(
auto
valIter =
_conTab_
.attrBBeginSafe(); valIter !=
_conTab_
.attrBEndSafe();
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++valIter) {
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double
cell = (
double
)
_conTab_
.joint(attrIter.key(), valIter.key());
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if
(cell < 5)
continue
;
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double
expected = semiExpected * (
double
)(valIter.val());
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_chi2Score_
+= std::pow(cell - expected, 2.0) / expected;
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}
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}
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}
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// ============================================================================
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// Returns the performance of current variable according to the test
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// ============================================================================
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template
<
typename
GUM_ELEMENT >
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double
Chi2TestPolicy< GUM_ELEMENT >::score
()
const
{
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if
(this->
isModified_
())
computeScore
();
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double
score
= 1
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-
ChiSquare::probaChi2
(
_chi2Score_
,
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(
_conTab_
.attrASize() - 1) * (
_conTab_
.attrBSize() - 1));
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return
score
;
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}
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// ============================================================================
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// Returns a second criterion to severe ties
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// ============================================================================
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template
<
typename
GUM_ELEMENT >
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double
Chi2TestPolicy< GUM_ELEMENT >::secondaryscore
()
const
{
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if
(this->
isModified_
())
computeScore
();
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return
_chi2Score_
;
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}
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template
<
typename
GUM_ELEMENT >
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void
Chi2TestPolicy< GUM_ELEMENT >::add
(
const
Chi2TestPolicy< GUM_ELEMENT >
& src) {
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ITestPolicy< GUM_ELEMENT >::add
(src);
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_conTab_
+= src.
ct
();
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}
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template
<
typename
GUM_ELEMENT >
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Chi2TestPolicy< GUM_ELEMENT >::Chi2TestPolicy
() :
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ITestPolicy
< GUM_ELEMENT >(),
_conTab_
(),
_chi2Score_
(0) {
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GUM_CONSTRUCTOR(
Chi2TestPolicy
);
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}
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template
<
typename
GUM_ELEMENT >
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Chi2TestPolicy< GUM_ELEMENT >::~Chi2TestPolicy
() {
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GUM_DESTRUCTOR(
Chi2TestPolicy
);
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;
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}
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template
<
typename
GUM_ELEMENT >
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void
*
Chi2TestPolicy< GUM_ELEMENT >::operator
new
(
size_t
s) {
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return
SmallObjectAllocator::instance
().
allocate
(s);
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}
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template
<
typename
GUM_ELEMENT >
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void
Chi2TestPolicy< GUM_ELEMENT >::operator
delete
(
void
* p) {
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SmallObjectAllocator::instance
().
deallocate
(p,
sizeof
(
Chi2TestPolicy
));
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}
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template
<
typename
GUM_ELEMENT >
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bool
Chi2TestPolicy< GUM_ELEMENT >::isTestRelevant
()
const
{
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return
(this->
nbObservation
() > 20 && this->
nbObservation
() >
_conTab_
.attrASize() * 5);
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}
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template
<
typename
GUM_ELEMENT >
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const
ContingencyTable< Idx, GUM_ELEMENT >
&
Chi2TestPolicy< GUM_ELEMENT >::ct
()
const
{
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return
_conTab_
;
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}
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template
<
typename
GUM_ELEMENT >
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std::string
Chi2TestPolicy< GUM_ELEMENT >::toString
()
const
{
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return
std::format(
"{}\t\t\tContingency Table : \n{}\n\t\t\tGStat : {}\n\t\t\tGStat : {}\n"
,
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ITestPolicy< GUM_ELEMENT >::toString
(),
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_conTab_
.toString(),
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this->score(),
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this->secondaryscore());
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}
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}
// End of namespace gum
Chi2TestPolicy.h
Headers of the Chi2TestPolicy.
double
gum::Chi2TestPolicy::add
void add(const Chi2TestPolicy< GUM_ELEMENT > &src)
Definition
Chi2TestPolicy_tpl.h:119
gum::Chi2TestPolicy::addObservation
void addObservation(Idx attr, GUM_ELEMENT value) override
Comptabilizes the new observation.
Definition
Chi2TestPolicy_tpl.h:67
gum::Chi2TestPolicy::toString
std::string toString() const
Definition
Chi2TestPolicy_tpl.h:157
gum::Chi2TestPolicy::~Chi2TestPolicy
~Chi2TestPolicy() override
Definition
Chi2TestPolicy_tpl.h:131
gum::Chi2TestPolicy::isTestRelevant
bool isTestRelevant() const override
Returns true if enough observation were made so that the test can be relevant.
Definition
Chi2TestPolicy_tpl.h:147
gum::Chi2TestPolicy::computeScore
void computeScore() const override
Recomputes the statistic from the beginning.
Definition
Chi2TestPolicy_tpl.h:80
gum::Chi2TestPolicy::_chi2Score_
double _chi2Score_
Definition
Chi2TestPolicy.h:144
gum::Chi2TestPolicy::_conTab_
ContingencyTable< Idx, GUM_ELEMENT > _conTab_
The contingency table used to keeps records of all observation.
Definition
Chi2TestPolicy.h:142
gum::Chi2TestPolicy::secondaryscore
double secondaryscore() const override
Returns a second criterion to severe ties.
Definition
Chi2TestPolicy_tpl.h:113
gum::Chi2TestPolicy::ct
const ContingencyTable< Idx, GUM_ELEMENT > & ct() const
Definition
Chi2TestPolicy_tpl.h:152
gum::Chi2TestPolicy::Chi2TestPolicy
Chi2TestPolicy()
Definition
Chi2TestPolicy_tpl.h:125
gum::Chi2TestPolicy::score
double score() const override
Returns the performance of current variable according to the test.
Definition
Chi2TestPolicy_tpl.h:101
gum::ChiSquare::probaChi2
static double probaChi2(double x, Size df)
computes the probability of chi2 value (used by the cache)
Definition
chiSquare.cpp:137
gum::ContingencyTable< Idx, GUM_ELEMENT >
gum::ITestPolicy::ITestPolicy
ITestPolicy()
Allocators and Deallocators redefinition.
Definition
ITestPolicy_tpl.h:49
gum::ITestPolicy::isModified_
bool isModified_() const
Definition
ITestPolicy_tpl.h:97
gum::ITestPolicy::addObservation
virtual void addObservation(Idx attr, GUM_ELEMENT value)
Comptabilizes the new observation.
Definition
ITestPolicy_tpl.h:70
gum::ITestPolicy::computeScore
virtual void computeScore() const
Recomputes the statistic from the beginning.
Definition
ITestPolicy_tpl.h:81
gum::ITestPolicy::add
void add(const ITestPolicy< GUM_ELEMENT > &src)
Definition
ITestPolicy_tpl.h:86
gum::ITestPolicy::nbObservation
Idx nbObservation() const
Comptabilizes the new observation.
Definition
ITestPolicy_tpl.h:76
gum::ITestPolicy::toString
std::string toString() const
Definition
ITestPolicy_tpl.h:92
gum::SmallObjectAllocator::instance
static SmallObjectAllocator & instance()
Definition
smallObjectAllocator_inl.h:96
gum::SmallObjectAllocator::allocate
void * allocate(const size_t &objectSize)
Allocates a block.
Definition
smallObjectAllocator.cpp:72
gum::SmallObjectAllocator::deallocate
void deallocate(void *pDeallocatedObject, const size_t &objectSize)
Deallocates an object.
Definition
smallObjectAllocator_inl.h:116
gum::Idx
Size Idx
Type for indexes.
Definition
types.h:79
gum
gum is the global namespace for all aGrUM entities
Definition
agrum.h:46
aGrUM
3.2.0
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